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Table 3 Differentially expressed transcripts after 24 h stimulation with 50 μM luteolin + 50 ng/ml LPS versus 50 ng/ml LPS

From: Luteolin triggers global changes in the microglial transcriptome leading to a unique anti-inflammatory and neuroprotective phenotype

Nr

ID

Symbol

Gene Name

FC*

Cov

UP-REGULATED

1

74315

Rnf145

Ring finger protein 145

3.27

11

2

210992

Lpcat1

Lysophosphatidylcholine acyltransferase 1

2.55

11

3

12522

Cd83

CD83 antigen

2.51

11

4

14630

Gclm

Glutamate-cysteine ligase, modifier subunit

2.46

10

5

16889

Lipa

Lysosomal acid lipase A

2.31

6

6

56336

B4galt5

UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5

2.30

8

7

14950

H13

Histocompatibility 13

2.30

7

8

14104

Fasn

Fatty acid synthase

2.28

4

9

12125

Bcl2l11

BCL2-like 11

2.16

14

10

16542

Kdr

Kinase insert domain protein receptor

2.16

9

11

216345

Ccdc131

Coiled-coil domain containing 131

2.11

7

DOWN-REGULATED

1

66141

Ifitm3

Interferon induced transmembrane protein 3

-13.74

9

2

433470

AA467197

Expressed sequence AA467197, miR-147

-9.32

9

3

16819

Lcn2

Lipocalin 2

-6.87

10

4

14469

Gbp2

Guanylate binding protein 2

-6.41

16

5

14962

Cfb

Complement factor B

-5.94

8

6

13198

Ddit3

DNA-damage inducible transcript 3

-5.58

11

7

16181

Il1rn

Interleukin 1 receptor antagonist

-5.28

33

8

55932

Gbp3

Guanylate binding protein 3

-4.72

10

9

56312

Nupr1

Nuclear protein 1

-4.35

15

10

75345

Slamf7

SLAM family member 7

-4.14

9

11

20210

Saa3

Serum amyloid A 3

-3.78

7

12

17386

Mmp13

Matrix metallopeptidase 13

-3.63

11

13

15439

Hp

Haptoglobin

-3.56

11

14

17167

Marco

Macrophage receptor with collagenous structure

-3.34

8

15

12266

C3

Complement component 3

-3.29

6

16

12870

Cp

Ceruloplasmin

-3.05

5

17

13011

Cst7

Cystatin F

-3.03

9

18

23882

Gadd45g

Growth arrest and DNA-damage-inducible 45 gamma

-2.95

11

19

242341

Atp6v0d2

ATPase, H+ transporting, lysosomal V0 subunit D2

-2.81

13

20

68774

Ms4a6d

Membrane-spanning 4-domains, subfamily A, member 6D

-2.75

19

21

83673

Snhg1

Small nucleolar RNA host gene 1

-2.75

24

22

12494

Cd38

CD38 antigen

-2.73

6

23

19655

Rbmx

RNA binding motif protein, X chromosome

-2.73

11

24

56405

Dusp14

Dual specificity phosphatase 14

-2.68

10

25

213002

Ifitm6

Interferon induced transmembrane protein 6

-2.57

8

26

12517

Cd72

CD72 antigen

-2.55

9

27

14129

Fcgr1

Fc receptor, IgG, high affinity I

-2.55

11

28

14130

Fcgr2b

Fc receptor, IgG, low affinity IIb

-2.48

27

29

231532

Arhgap24

Rho GTPase activating protein 24

-2.46

8

30

29818

Hspb7

Heat shock protein family, member 7 (cardiovascular)

-2.45

5

31

17476

Mpeg1

Macrophage expressed gene 1

-2.43

6

32

66222

Serpinb1a

Serine peptidase inhibitor, clade B, member 1a

-2.41

10

33

78771

Mctp1

Multiple C2 domains, transmembrane 1

-2.39

8

34

20568

Slpi

Secretory leukocyte peptidase inhibitor

-2.39

9

35

12507

Cd5

CD5 antigen

-2.35

9

36

50778

Rgs1

Regulator of G-protein signaling 1

-2.35

11

37

21897

Tlr1

Toll-like receptor 1

-2.20

5

38

16149

Cd74

CD74 antigen

-2.17

5

39

73167

Arhgap8

Rho GTPase activating protein 8

-2.13

8

40

15064

Mr1

Major histocompatibility complex, class I-related

-2.06

7

41

347722

Centg2

Centaurin, gamma 2

-2.04

11

42

98365

Slamf9

SLAM family member 9

-2.04

8

43

72999

Insig2

Insulin induced gene 2

-2.00

8

  1. Significance analysis of triplicate microarrays was performed with a false discovery rate of 0.1% and a minimum probe coverage of 3. ID, Entrez Gene ID; FC: Fold change; Cov: probe coverage; * validated by Taqman realtime RT-PCR