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Table 2 C/EBPβ binding sites and primers used in quantitative ChIP assay.

From: Pro-inflammatory gene expression and neurotoxic effects of activated microglia are attenuated by absence of CCAAT/enhancer binding protein β

Target Gene

C/EBPβ binding site sequence (5→3') Consensus: ATTGCGCAAT

Genomic localization respect to ATG

Primer forward (5→3')

Primer reverse (5→3')

NOS2

ggagTGaaGCAATga

-892/-907

TTATgAgATgTgCCCTCTgC

CCACCTAAggggAACAgTgA

IL1β

tgtgTgaaGaAAgaa

-16/-31

TCAggAACAgTTgCCATAgC

AgACCTATACAACggCTCCT

IL6

gTttCCAATcagccc

-173/-188

gTTgTgATTCTTTCgATgCT

ggAATTgACTATCgTTCTTg

TNFα

agggTTtgGaAAgtt

-336/-351

TCTCATTCAACCCTCggAAA

CACACACACCCTCCTgATTg

IL10

aggATTGaGaAATaa

-463/-448

TgACTTCCgAgTCAgCAAgA

AgAggCCCTCATCTgTggAT