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Table 1 Microarray analysis on hypothalamus of 10-week-old Nestin-Pex5 −/− mice

From: Peroxisome deficiency but not the defect in ether lipid synthesis causes activation of the innate immune system and axonal loss in the central nervous system

Cytokine-cytokine receptor interaction

Complement

 

Fold change

C3ar1

complement component 3a receptor 1

11.28 ***

C1qb

complement component 1, q subcomponent, beta polypeptide

9.4 ***

C4b

complement component 4B

8.47 ***

C1qa

complement component 1, q subcomponent, alpha polypeptide

7.64 ***

Chemokines

Cxcl13

chemokine (C-X-C motif) ligand 13

16.8 ***

Ccl6

chemokine (C-C motif) ligand 6

11.93 ***

Ccl3

chemokine (C-C motif) ligand 3

8.13 ***

IL12b

Interleukin 12b

5.67 ***

Leukocyte transedothelial migration

Itgb2

Integrin beta 2

5.57 ***

Itgam

Integrin alpha M

3.56 ***

ICAM1

Intercellular adhesion molecule 1

4.12 ***

VCAM1

Vascular cell adhesion molecule 1

1.52 ***

Antigen processing and presentation

H2-K1

Histocompatibility 2, K1, K region

5.57 ***

H2-D1

Histocompatibility 2, D region locus 1

3.56 ***

Fcgr2b

Fc receptor, IgG, low affinity IIb

6.21 ***

Fcgr3

Fc receptor, IgG, low affinity III

4.41 ***

P2Y6

Pyrimidinergic receptor P2Y, G-protein coupled 6

5.22 ***

B2m

beta-2 microglobulin

3.06 ***

Ctse

cathepsin E

1.52 ***

Toll-like receptor signaling pathway

TLR2

Toll-like receptor 2

4.70 ***

TLR1

Toll-like receptor 1

4.43 ***

TLR7

Toll-like receptor 7

1.98 ***

TLR4

Toll-like receptor 4

1.70 ***

Anti-inflammatory markers

IL4

Interleukin 4

0.93

IL10

Interleukin 10

1.03

IL13

Interleukin 13

1.01

Arg1

Arginase-1

1.13

TGFβ

Transforming growth factor β

2.54 ***

HO-1

Heme oxygenase-1

2.37 ***

Anti-oxidantia

Cat

Catalase

1.23 *

MnSOD

Manganese superoxide dismutase

0.95

Prdx6

Peroxiredoxin 6

1.34 ***

Prdx1

Peroxiredoxin 1

1.12 *

Gpx1

Glutathione peroxidase 1

1.25 ***

  1. Only the most affected KEGG pathways are represented. Values are given as means of 4 independent samples. * p < 0.05, *** p < 0.001.