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Table 3 Gene signature of MHC class II+ Minus versus Non-hematopoietic cells

From: MHC class II expression and potential antigen-presenting cells in the retina during experimental autoimmune uveitis

Gene aymbol

Gene name

Log2FC (M/NH)

FDR

Ly86

Lymphocyte antigen 86

8.243860053

5.61E-09

Ctss

Cathepsin S

6.957996729

9.43E-09

Bin2

Bridging integrator 2

9.235207039

2.73E-08

Rac2

RAS-related C3 botulinum substrate 2

10.60734368

2.73E-08

Clec5a

C-type lectin domain family 5, member a

15.17887896

2.73E-08

F4/80

Adhesion G protein-coupled receptor E1

9.972224185

3.90E-08

Fcgr3

Fc receptor, IgG, low affinity III

7.775892583

1.20E-07

Gatm

Glycine amidinotransferase (L-arginine:glycine amidinotransferase)

8.65338182

2.18E-07

Anxa3

Annexin A3

8.397158434

2.55E-07

Ncr1

Natural cytotoxicity triggering receptor 1

14.1982847

3.02E-07

C1qc

Complement component 1, q subcomponent, C chain

7.38704385

4.49E-07

Fli1

Friend leukemia integration 1

10.50996433

1.65E-06

Ccl12

Chemokine (C-C motif) ligand 12

15.2104167

2.66E-06

Hexb

Hexosaminidase B

6.279744813

2.88E-06

Fyb

FYN binding protein

6.513964387

3.63E-06

Cx3cr1

Chemokine (C-X3-C motif) receptor 1

6.581332934

3.77E-06

Ctla4

Cytotoxic T-lymphocyte-associated protein 4

14.1739945

4.06E-06

Cd53

CD53 antigen

6.217529713

5.05E-06

Fcgr1

Fc receptor, IgG, high affinity I

10.93059649

5.90E-06

IBA1

Allograft inflammatory factor 1

7.685685163

7.39E-06

Kctd12

Potassium channel tetramerisation domain containing 12

6.343559988

7.75E-06

Lmo2

LIM domain only 2

7.844870456

8.06E-06

Lilrb4

Leukocyte immunoglobulin-like receptor, subfamily B, member 4A

9.104873913

8.23E-06

Psd4

Pleckstrin and Sec7 domain containing 4

13.93584229

8.46E-06

Il18r1

Interleukin 18 receptor 1

11.54035827

8.91E-06

Mpeg1

Macrophage expressed gene 1

5.934098653

9.09E-06

Csf1r

Colony stimulating factor 1 receptor

6.563851162

1.14E-05

Itgb2

Integrin beta 2

7.391669553

1.16E-05

Arhgdib

Rho, GDP dissociation inhibitor (GDI) beta

6.250951528

1.23E-05

C1qb

Complement component 1, q subcomponent, beta polypeptide

6.508090307

1.42E-05

  1. FDR false discovery rate