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Table 1 Top 20 overlapped and upregulated mRNAs in mouse astrocytes treated with Nef protein (50 ng/ml) for 6 h and 12 h

From: HIV-1 Nef-induced lncRNA AK006025 regulates CXCL9/10/11 cluster gene expression in astrocytes through interaction with CBP/P300

Gene symbol

Upregulated folds

6 h/0 h

12 h/0 h

Cxcl11

105.05796

473.09506

Cxcl9

43.443104

213.93571

Ifnb1

112.73581

154.63144

Il1b

54.497185

153.78612

Gm4841

52.749744

149.3729

Cxcl2

98.37795

131.17091

Irg1

69.53818

101.9587

Ccl5

39.71899

94.32046

Il6

21.031158

74.925606

Ccl7

27.82146

74.49636

Fam26f

11.689228

64.880646

Cd69

30.492313

53.828453

Cxcl10

37.51984

45.796886

Cxcl1

20.680431

45.20861

Il1a

13.884002

49.921574

Cxcl3

38.239742

43.34039

Tnfsf10

4.3851957

24.53629

Tnf

30.36271

24.412766

Ccl3

11.2570715

15.065439

Ccl2

9.46433

10.722074