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Table 2 Top 20 overlapped and upregulated lncRNAs in mouse astrocytes stimulated with Nef protein (50 ng/ml) for 6 h and 12 h

From: HIV-1 Nef-induced lncRNA AK006025 regulates CXCL9/10/11 cluster gene expression in astrocytes through interaction with CBP/P300

lncRNA seqname Length Upregulated folds
6 h/0 h 12 h/0 h
Gm16685 1592 33.808704 98.312874
Gm5970 1216 11.263321 75.315765
Gm12250 1274 6.2884264 61.74965
AK085771 1165 6.540899 66.45514
uc008roq.1 3961 45.042114 58.77
Gm4955 913 6.5966477 50.151352
A530040E14Rik 1262 10.544557 50.162678
Gm12407 720 6.1827254 33.648342
Gm13309 324 6.142315 30.465094
Mx2 2428 12.378684 37.599354
AK151815 1592 7.3327208 26.562384
MM9LINCRNAEXON11240- 1100 10.792236 20.239393
uc008smk.1 701 6.23503 32.482025
ENSMUST00000160565 1414 3.362174 22.119934
AK139352 4337 6.970084 36.466106
AK145170 2791 9.817351 20.934488
ENSMUST00000135659 1443 14.289103 18.727198
NR_003507 1848 3.7799745 14.091469
Gm8773 1268 5.3409157 10.783084
uc008zif.1 704 2.7248611 12.014651