Table 1 Names and description of genes associated with CSPG synthesis and turnover

Acan

Aggrecan

Aco1

Aconitase 1, soluble

Adam2

ADAM metallopeptidase domain 2

Adam7

ADAM metallopeptidase domain 7

Adam8

ADAM metallopeptidase domain 8

Adam9

ADAM metallopeptidase domain 9

Adam10

ADAM metallopeptidase domain 10

Adam11

ADAM metallopeptidase domain 11

Adam12

ADAM metallopeptidase domain 12

Adam15

ADAM metallopeptidase domain 15

Adam17

ADAM metallopeptidase domain 17

Adam18

ADAM metallopeptidase domain 18

Adam19

ADAM metallopeptidase domain 19

Adam20

ADAM metallopeptidase domain 20

Adam21

ADAM metallopeptidase domain 21

Adam22

ADAM metallopeptidase domain 22

Adam23

ADAM metallopeptidase domain 23

Adam28

ADAM metallopeptidase domain 28

Adam29

ADAM metallopeptidase domain 29

Adam30

ADAM metallopeptidase domain 30

Adam32

ADAM metallopeptidase domain 32

Adam33

ADAM metallopeptidase domain 33

Adamts1

ADAM metallopeptidase with thrombospondin type 1 motif, 1

Adamts2

ADAM metallopeptidase with thrombospondin type 1 motif, 2

Adamts3

ADAM metallopeptidase with thrombospondin type 1 motif, 3

Adamts4

ADAM metallopeptidase with thrombospondin type 1 motif, 4

Adamts5

ADAM metallopeptidase with thrombospondin type 1 motif, 5

Adamts6

ADAM metallopeptidase with thrombospondin type 1 motif, 6

Adamts7

ADAM metallopeptidase with thrombospondin type 1 motif, 7

Adamts8

ADAM metallopeptidase with thrombospondin type 1 motif, 8

Adamts9

ADAM metallopeptidase with thrombospondin type 1 motif, 9

Adamts10

ADAM metallopeptidase with thrombospondin type 1 motif, 10

Adamts12

ADAM metallopeptidase with thrombospondin type 1 motif, 12

Adamts14

ADAM metallopeptidase with thrombospondin type 1 motif, 14

Adamts15

ADAM metallopeptidase with thrombospondin type 1 motif, 15

Adamts16

ADAM metallopeptidase with thrombospondin type 1 motif, 16

Adamts17

ADAM metallopeptidase with thrombospondin type 1 motif, 17

Adamts18

ADAM metallopeptidase with thrombospondin type 1 motif, 18

Adamts19

ADAM metallopeptidase with thrombospondin type 1 motif, 19

Adamts20

ADAM metallopeptidase with thrombospondin type 1 motif, 20

App

Amyloid beta (A4) precursor protein

B3galt6

UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6

B3gat1

Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)

B3gat2

Beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)

B3gat3

Beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)

B4galt7

Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7

Bcan

Brevican

Bgn

Biglycan

Bsg

Basigin

Chpf

Chondroitin polymerizing factor

Chpf2

Chondroitin polymerizing factor 2

Chst1

Carbohydrate (keratan sulfate Gal-6) sulfotransferase 1

Chst2

Carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2

Chst3

Carbohydrate (chondroitin 6) sulfotransferase 3

Chst4

Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4

Chst5

Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5

Chst6

Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6

Chst7

Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7

Chst8

Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8

Chst9

Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9

Chst10

Carbohydrate sulfotransferase 10

Chst11

Carbohydrate (chondroitin 4) sulfotransferase 11

Chst12

Carbohydrate (chondroitin 4) sulfotransferase 12

Chst13

Carbohydrate (chondroitin 4) sulfotransferase 13

Chst14

Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14

Chst15

Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15

Chsy1

Chondroitin sulfate synthase 1

Chsy3

Chondroitin sulfate synthase 3

Cp

Ceruloplasmin (ferroxidase)

Csgalnact1

Chondroitin sulfate N-acetylgalactosaminyltransferase 1

Csgalnact2

Chondroitin sulfate N-acetylgalactosaminyltransferase 2

Dse

Dermatan sulfate epimerase

Ext1

Exostosin glycosyltransferase 1

Ext2

Exostosin glycosyltransferase 2

Extl1

Exostosin-like glycosyltransferase 1

Extl2

Exostosin-like glycosyltransferase 2

Extl3

Exostosin-like glycosyltransferase 3

Fam20b

Family with sequence similarity 20, member B

Fdx1

Ferredoxin 1

Fth1

Ferritin, heavy polypeptide 1

Ftl

Ferritin, light polypeptide

Ftmt

Ferritin mitochondrial

Galns

Galactosamine (N-acetyl)-6-sulfate sulfatase

Gpc1

Glypican 1

Gpc2

Glypican 2

Gpc3

Glypican 3

Gpc4

Glypican 4

Gpc5

Glypican 5

Gpc6

Glypican 6

Gsta1

Glutathione S-transferase alpha 1

Gsta2

Glutathione S-transferase alpha 2

Gsta3

Glutathione S-transferase alpha 3

Gsta4

Glutathione S-transferase alpha 4

Gsta5

Glutathione S-transferase alpha 5

Gstk1

Glutathione S-transferase kappa 1

Gstm1

Glutathione S-transferase mu 1

Gstm2

Glutathione S-transferase mu 2 (muscle)

Gstm3

Glutathione S-transferase mu 3 (brain)

Gstm4

Glutathione S-transferase mu 4

Gstm5

Glutathione S-transferase mu 5

Gstp1

Glutathione S-transferase pi 1

Gstt1

Glutathione S-transferase theta 1

Gstt2

Glutathione S-transferase theta 2

Hamp

Hepcidin antimicrobial peptide

Hapln1

Hyaluronan and proteoglycan link protein 1

Hapln2

Hyaluronan and proteoglycan link protein 2

Has1

Hyaluronan synthase 1

Has2

Hyaluronan synthase 2

Has3

Hyaluronan synthase 3

Heph

Hephaestin

Hmox1

Heme oxygenase (decycling) 1

Hmox2

Heme oxygenase (decycling) 2

Hp

Haptoglobin

Hpr

Haptoglobin-related protein

Ilf3

Interleukin enhancer binding factor 3, 90 kDa

Ireb2

Iron-responsive element binding protein 2

Ltf

Lactotransferrin

Mfi2

Antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5

Mgst1

Microsomal glutathione S-transferase 1

Mgst2

Microsomal glutathione S-transferase 2

Mgst3

Microsomal glutathione S-transferase 3

Mmp1

Matrix metallopeptidase 1 (interstitial collagenase)

Mmp2

Matrix metallopeptidase 2 (gelatinase A, 72 kDa gelatinase, 72 kDa type IV collagenase)

Mmp3

Matrix metallopeptidase 3 (stromelysin 1, progelatinase)

Mmp7

Matrix metallopeptidase 7 (matrilysin, uterine)

Mmp8

Matrix metallopeptidase 8 (neutrophil collagenase)

Mmp9

Matrix metallopeptidase 9 (gelatinase B, 92 kDa gelatinase, 92 kDa type IV collagenase)

Mmp10

Matrix metallopeptidase 10 (stromelysin 2)

Mmp11

Matrix metallopeptidase 11 (stromelysin 3)

Mmp12

Matrix metallopeptidase 12 (macrophage elastase)

Mmp13

Matrix metallopeptidase 13 (collagenase 3)

Mmp14

Matrix metallopeptidase 14 (membrane-inserted)

Mmp15

Matrix metallopeptidase 15 (membrane-inserted)

Mmp16

Matrix metallopeptidase 16 (membrane-inserted)

Mmp17

Matrix metallopeptidase 17 (membrane-inserted)

Mmp19

Matrix metallopeptidase 19

Mmp20

Matrix metallopeptidase 20

Mmp21

Matrix metallopeptidase 21

Mmp23b

Matrix metallopeptidase 23B

Mmp24

Matrix metallopeptidase 24 (membrane-inserted)

Mmp25

Matrix metallopeptidase 25

Mmp26

Matrix metallopeptidase 26

Mmp27

Matrix metallopeptidase 27

Mmp28

Matrix metallopeptidase 28

Ncan

Neurocan

Ndst1

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

Ndst2

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2

Slc11a1

Solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1

Slc11a2

Solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2

Slc39a14

Solute carrier family 39 (zinc transporter), member 14

Slc40a1

Solute carrier family 40 (iron-regulated transporter), member 1

Tf

Transferrin

Tfr2

Transferrin receptor 2

Tfrc

Transferrin receptor

Timp3

TIMP metallopeptidase inhibitor 3

Ust

Uronyl-2-sulfotransferase

Vcan

Versican

Xylt1

Xylotransferase I

Xylt2

Xylotransferase II