Locationa | Chromatin accessibility | Distance to nearest gene (bp) | Gene | Full gene name | Gene expression | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
CCI versus Naïve | CFA versus Naïve | CCI versus Naïve | CFA versus Naïve | ||||||||
Log2FC | p-value | Log2FC | p-value | Log2FC | FDR | Log2FC | FDR | ||||
chr17:11683581-11684211 | − 1.06 | 6.34E-05 | − 0.99 | 1.64E-04 | 34 | Msx2 | Msh homeobox 2 | – | n.s. | – | n.s. |
chr1:92513274-92513499 | − 1.00 | 2.72E-04 | -1.01 | 8.90E-05 | 261576 | Tshz3 | Teashirt zinc finger homeobox 3 | – | n.s. | – | n.s. |
chr8:47237180-47237538 | − 0.99 | 2.34E-05 | − 0.97 | 8.26E-04 | − 129442 | Grik4 | Glutamate ionotropic receptor kainate type subunit 4 | 0.669 | 3.30E-06 | 0.672 | 7.20E-06 |
chr6:144123384-144123972 | − 0.95 | 4.70E-04 | − 0.71 | 8.53E-05 | − 82 | Wdr60 | WD repeat domain 60 | − 0.415 | 3.08E-02 | − 0.499 | 1.33E-02 |
chrX:70596272-70597179 | − 0.95 | 1.45E-04 | − 0.80 | 1.87E-04 | 149 | Dlg3 | Discs large MAGUK scaffold protein 3 | − 0.599 | 1.19E− 03 | − 0.674 | 6.12E− 04 |
chr19:34760039-34760205 | − 0.94 | 7.18E-04 | -0.64 | 3.23E-04 | 881 | Nr3c2 | Nuclear receptor subfamily 3, group C, member 2 | – | n.s. | – | n.s. |
chr2:88365560-88366693 | − 0.77 | 8.32E-04 | -0.61 | 4.17E-04 | 21600 | Rbis | Ribosomal biogenesis factor | – | n.s. | − 0.501 | 2.48E-03 |
chr17:5634167-5634689 | − 0.77 | 6.58E-04 | -0.88 | 8.48E-04 | 123043 | Agtpbp1 | ATP/GTP binding protein 1 | 0.669 | 5.58E-13 | 0.572 | 1.23E-09 |
chr2:239413846-239414572 | − 0.75 | 3.34E-04 | -0.68 | 6.17E-04 | − 673 | Cxxc4 | CXXC finger protein 4 | – | n.s. | – | n.s. |
chr3:97720973-97722482 | − 0.71 | 8.27E-04 | -0.70 | 8.61E-04 | − 2173 | Mpped2 | Metallophosphoesterase domain containing 2 | – | n.s. | – | n.s. |
chr16:23432936-23433376 | 0.71 | 3.99E-04 | 0.71 | 4.94E-04 | − 276331 | Sh2d4a | SH2 domain containing 4A | – | n.s. | – | n.s. |
chr14:93768297-93768703 | 0.75 | 8.15E-04 | 1.00 | 1.86E-04 | − 1272606 | Cobl | Cordon-bleu WH2 repeat protein | – | n.s. | – | n.s. |
chr3:117326358-117326776 | 0.86 | 1.07E-04 | 0.87 | 1.87E-04 | − 8645 | Slc24a5 | Solute carrier family 24 member 5 | – | n.s. | – | n.s. |
chr7:72282656-72283204 | 0.87 | 5.84E-04 | 1.00 | 2.38E-05 | − 489510 | Mtdh | Metadherin | – | n.s. | – | n.s. |
chr7:76825894-76826308 | 0.95 | 4.39E-04 | 0.75 | 4.20E-04 | -45284 | Rrm2b | Ribonucleotide reductase regulatory TP53 inducible subunit M2B | 0.318 | 2.54E-02 | 0.534 | 1.15E-04 |
chr8:68261923-68262408 | 1.07 | 2.15E-05 | 0.81 | 8.92E-04 | 20424 | Map2k5 | Mitogen activated protein kinase kinase 5 | – | n.s. | – | n.s. |
chr14:48665324-48665682 | 1.10 | 9.99E-04 | 0.96 | 6.22E-04 | − 60542 | Arap2 | ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 | 0.401 | 1.31E-03 | 0.800 | 2.69E-11 |
chr2:104740823-104741617 | 1.11 | 9.13E-05 | 0.67 | 7.82E-05 | − 3223 | Cp | Ceruloplasmin | – | n.s. | – | n.s. |
chr7:69057806-69058124 | 1.20 | 2.80E-04 | 1.14 | 8.43E-04 | 46985 | LOC500846 | Hypothetical protein LOC500846 | – | n.s. | – | n.s. |
chr15:48090366-48090685 | 1.20 | 2.14E-04 | 1.10 | 1.15E-04 | 59452 | Kif13b | Kinesin family member 13B | − 1.372 | 6.53E-35 | − 0.864 | 8.10E-14 |
chr5:75716406-75716663 | 1.22 | 1.09E-04 | 0.88 | 2.39E-04 | − 39951 | Lpar1 | Lysophosphatidic acid receptor 1 | − 0.759 | 1.35E-16 | − 0.759 | 5.95E-16 |
chr11:1269991-1270529 | 1.26 | 3.86E-05 | 0.69 | 8.21E-04 | − 487306 | Epha3 | Eph receptor A3 | – | n.s. | – | n.s. |
chr12:17820620-17821049 | 1.41 | 4.21E-05 | 0.81 | 9.32E-04 | 55600 | LOC498155 | LRRGT00167 | – | n.s. | – | n.s. |
chr12:3340812-3341234 | 1.49 | 1.11E-04 | 0.83 | 4.64E-04 | − 514790 | Clec4m | C-type lectin domain family 4 member M | – | n.s. | – | n.s. |
chr13:10820032-10820423 | 1.58 | 1.21E-05 | 0.86 | 6.03E-04 | 1340233 | Olr1065 | Olfactory receptor 1065 | – | – | – | – |
chr12:8713579-8713997 | 1.58 | 2.56E-04 | 1.31 | 2.98E-05 | − 11748 | Slc46a3 | Solute carrier family 46, member 3 | – | n.s. | 0.777 | 1.20E-02 |
chr15:75876479-75876957 | 1.79 | 2.13E-05 | 0.83 | 8.63E-04 | 1860057 | Pcdh9 | Protocadherin 9 | 0.778 | 1.29E-10 | 0.871 | 1.50E-12 |
chr8:4288257-4288665 | 3.64 | 5.15E-08 | 2.03 | 1.25E-04 | − 31769 | Vom2r18 | Vomeronasal 2 receptor, 18 | – | n.s. | – | n.s. |
chr8:4322772-4323450 | 3.88 | 7.77E-09 | 2.35 | 5.51E-05 | 2729 | Vom2r17 | Vomeronasal 2 receptor, 17 | – | – | – | – |
chr8:4337259-4338234 | 5.59 | 2.35E-09 | 3.45 | 5.54E-04 | 17365 | Vom2r17 | Vomeronasal 2 receptor, 17 | – | – | – | – |
chr8:4292048-4292933 | 5.64 | 2.72E-08 | 4.01 | 1.42E-04 | − 27739 | Vom2r18 | Vomeronasal 2 receptor, 18 | – | n.s. | – | n.s. |