Fig. 3

tMCAO followed by 3 h reperfusion induces robust changes in transcriptome in the CP of WT mice. A Gene clustering and heat map of top 1000 differentially regulated genes (q < 0.05) in the CP ipsilateral to tMCAO compared to the CP contralateral to tMCAO. B–D gProfiler gene ontology graphs and top GO terms related to the indicated clusters. The circle size correlates with the number of genes related to the GO term. No GO term was found related to the blue cluster. BP biological process, MF molecular function, CC cellular component