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Table 2 Oligonucleotide PCR primers

From: Inflammasome induction in Rasmussen’s encephalitis: cortical and associated white matter pathogenesis

Gene

Primer

ASC

Forward 5′-GCC TGC ACT TTA TAG ACC AGC-3′

 

Reverse 5′-GCT TCC GCA TCT TGC TTG G-3′

CASP1

Forward 5′-TCC AAT AAT GGA CAA GTC AAG CC-3′

 

Reverse 5′-GCT GTA CCC CAG ATT TTG TAG CA-3′

CD3e

Forward 5′-GAT GCA GGG CAC TCA CT-3′

 

Reverse 5′-CAT TAC CAT CTT GCC CCC AA-3′

GAPDH

Forward 5′-AGC CTT CTC CAT GGT GGT GAA GAC-3′

 

Reverse 5′-CGG AGT CAA CGG ATT TGG TCG-3′

HLA-DRA

Forward 5′-GGA CAA AGC CAA CCT GGA AA-3′

 

Reverse 5′-AGG ACG TTG GGC TCT CTC AG-3′

IL1b

Forward 5′-CCA AAG AAGAAG ATG GAA AAG C-3′

 

Reverse 5′-GGT GCT GAT GTA CCA GTT GGG-3′

IL18

Forward 5′-TCT TCA TTG ACC AAG GAA ATC GG-3′

 

Reverse 5′-TCC GGG GTG CAT TAT CTC TAC-3′

NLRP1

Forward 5′-ATT CCA GTT TGT GCG AAT CCA-3′

 

Reverse 5′-GTT CCT TGG GGA GTA TTT CCA G-3′

NLRP3

Forward 5′-GAT CTT CGC TGC GAT CAA CAG-3′

 

Reverse 5′-CGT GCA TTA TCT GAA CCC CAC-3′

NLRC4

Forward 5′-TGC ATC ATT GAA GGG GAA TCT G-3′

 

Reverse 5′-GAT TGT GCC AGG TAT ATC CAG G-3′

CD8

Forward 5′-CCG ACG ATC ATG CAG AAG TA-3′

 

Reverse 5′-GGT GAA GAG GTG GAA CAG GA-3′

GFAP

Forward 5′-GAG ATC GCCACC TAC AG-3′

 

Reverse 5′-CAC ATC CTT GRG CTC CTG-3′