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Table 2 The 20 strongest regulated eQTLs in the F2(DAxPVG) intercross

From: Genetic variability in the rat Aplec C-type lectin gene cluster regulates lymphocyte trafficking and motor neuron survival after traumatic nerve root injury

Transcript ID

Gene symbol

Gene name

Locus

Chr

cM

LOD score

PValue

10926967

LOC501110

Similar to glutathione S-transferase A1 (GTH1) (HA subunit 1) (GST-epsilon) (GSTA1-1)

D9Rat130

9

57

65.6988845987

0

10824140

Msr2_predicted

Macrophage scavenger receptor 2 (predicted)

D2Rat44

2

15

55.6575859002

0

10877130

Ltb4dh

Leukotriene B4 12-hydroxydehydrogenase

D5Rat77

5

36

39.6332668113

0

10908861

Ldha

Lactate dehydrogenase A

D1Rat265

1

2

38.7544785249

0

10802013

Cd74

CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)

D10Mgh25

10

62

37.3794915401

0

10711664

Acadsb

Acyl-Coenzyme A dehydrogenase, short/branched chain

D1Arb21

1

7

35.2231095445

0

10828344

RT1-Da

RT1 class II, locus Da

D10Mgh25

10

62

32.6411125813

0

10831567

RT1-Bb

RT1 class II, locus Bb

D10Mgh25

10

62

31.6910114967

0

10784621

Ephx2

Epoxide hydrolase 2, cytoplasmic

D15Rat123

15

87

30.8274874187

0

10714907

Ifit1

Interferon-induced protein with tetratricopeptide repeats 1

D1Rat301

1

9

27.9442878525

0

10829888

Pbld

Phenazine biosynthesis-like protein domain containing

D20Rat7

20

107

25.4372427332

0

10725724

Eif3c

Eukaryotic translation initiation factor 3, subunit C

D1Arb21

1

7

25.4264147505

0

10812515

Arsb

Arylsulfatase B

D2Rat3

2

12

23.7304626898

0

10725778

Nupr1

Nuclear protein 1

D1Arb21

1

7

23.4051659436

0

10866041

Klrk1

Killer cell lectin-like receptor subfamily K, member 1

D4Got130

4

31

21.7980872017

0

10825931

MGC108896

Similar to glutathione transferase GSTM7-7

D2Rat44

2

15

21.7509939262

0

10725846

Ccdc95

Coiled-coil domain containing 95

D1Arb21

1

7

21.0341839479

0

10856673

Slc4a5

Solute carrier family 4, sodium bicarbonate cotransporter, member 5

D4Rat177

4

29

20.8720767896

0

10858559

Clec4a3

C-type lectin domain family 4, member a3 (Dcir3)

D4Got130

4

31

20.3859516269

0

10916458

RGD1309108_predicted

Similar to hypothetical protein FLJ23554 (predicted)

D8Rat41

8

50

20.0893368764

0

  1. eQTL: expression quantitative trait loci.