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Table 2 In vivo validation of endothelium-related genes highly expressed in BMECs compared to SCMECs

From: Gene expression comparison reveals distinct basal expression of HOX members and differential TNF-induced response between brain- and spinal cord-derived microvascular endothelial cells

Gene

Probe

MA (in vitro)

RT-qPCR (in vivo)

Bgn

A_43_P11812

22.9

1.5

Col3a1

A_44_P146518

20.9

2.3

Col1a1

A_44_P238421

17.2

ND

Col1a2

A_43_P12783

13.6

1.9

Slit3

A_44_P1024315

12.8

ND

Mgp

A_42_P588944

12.3

ND

Cldn9

A_44_P419898

10.0

46.2

Spp1

A_44_491796

4.9

0.5

Ctgf

A_42_P484738

4.8

2.1

Tgfb2

A_44_P246538

2.5

1.9

  1. Ratio of the values in BMEC versus SCMEC monolayers (MA microarray) and freshly extracted BMVs versus SCMVs (RT-qPCR)
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Journal of Neuroinflammation

ISSN: 1742-2094