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Table 1 List of 50 cell surface candidate genes specifically expressed by microglia or infiltrating macrophages

From: Differential transcriptional profiles identify microglial- and macrophage-specific gene markers expressed during virus-induced neuroinflammation

Microglia cell surface enriched genes Macrophage cell surface enriched genes
Gene symbol Gene name Gene symbol Gene name
Ecscr Endothelial cell surface expressed chemotaxis and apoptosis regulator Ecm1 Extracellular matrix protein 1
Scamp5 Secretory carrier membrane protein 5 Emb Embigin
Ptprm Protein tyrosine phosphatase, receptor type M Slco3a1 Solute carrier organic anion transporter Family member 3a1
Kcnd1 Potassium voltage-gated channel subfamily D, member 1 Emp1 Epithelial membrane protein 1
Sdk1 Sidekick cell adhesion molecule 1 Ms4a7 Membrane spanning 4-domains A7
Clstn1 Calsyntenin-1 Gpr132 G protein-coupled receptor 132
Sgce Sarcoglycan epsilon Pdpn Podoplanin
Slc12a2 Solute carrier family 12, member 2 Alcam Activated Leukocyte Cell Adhesion Molecule
Cadm1 Cell adhesion molecule 1 Ms4a6d Membrane-spanning 4-domains, subfamily A, member 6a
Sema4g Semaphorin 4G Msr1 Macrophage scavenger receptor-1
Pros1 Protein S Kcnn4 Potassium calcium-activated channel subfamily N, member 4
Slco2b1 Solute carrier organic anion transporter family, member 2b1 Scarf1 Scavenger receptor class F member 1
Rtn4rl1 Reticulon 4 Receptor Like 1 Antxr2 Anthrax toxin receptor 2
Cmtm4 CKLF-like MARVEL transmembrane domain-containing protein 4 Fam26f Calcium homeostasis modulator family, member 6
Fat3 Fat atypical cadherin 3 Ms4a8a Membrane-spanning 4-domains subfamily A, member 8A
Smo Smoothened homolog Wfdc17 Activated macrophage/microglia WAP domain protein
Mrc2 Mannose receptor C type 2 Lilr4b Leukocyte immunoglobulin-like receptor, subfamily B, member 4B
Jam2 Junctional adhesion molecule 2 Trem-1 Triggering receptor expressed on myeloid cells 1
Plxna4 Plexin A4 Gpr141 Probable G-protein coupled receptor 141
Slc46a1 Solute carrier family 46, member 1 Clec4e C-type lectin domain family 4, member E
Agmo Alkylglycerol monooxygenase (Tmem195) Sirpb1a SIRP-beta B-type
Gpr165 G protein-coupled receptor 165 Bst1 Bone marrow stromal cell antigen 1
Tmem204 Transmembrane Protein 204 Lilra6 Leukocyte immunoglobulin-like receptor subfamily A member 6
P2ry12 P2Y purinoceptor 12 Slfn4 Schlafen-4
   Ifitm6 Interferon-induced transmembrane protein 6
   Iqgap2 IQ motif-containing GTPase activating protein 2
  1. Cell surface localization of microglia- (left) or infiltrating macrophage- (right) specific gene products was determined using primary literature