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Table 5 Prediction of key miRNAs target genes and pathways involved

From: Transcriptome profiling of microRNAs reveals potential mechanisms of manual therapy alleviating neuropathic pain through microRNA-547-3p-mediated Map4k4/NF-κb signaling pathway

MiRNA

No. of genes

Target genes

KEGG pathways

miR-375-3p

86

Atpaf1, Cacnb4, Cstf2, Foxe1, Fzd8, Golph3, Otud7b, Pax6, Ube3a, Ywhaz

mRNA surveillance pathway

miR-449a-5p

45

Fam45a, Gmppb, Hdac1, Lrrc59, Lrtm2, Ltbp2, Notch1, Pde1c, Plcb1, Plod1

Thyroid hormone signaling pathway

Adrenergic signaling in cardiomyocytes

miR-547-3p

172

Adcy2, Ap1s3, Cdh2, Igf1、Kitlg, Map4k4, Pdgfrb、Rptor, Smad2, Ube2h

Pathways in cancer

PI3K–Akt signaling pathway

Rap1 signaling pathway

TGF-beta signaling pathway

Ubiquitin-mediated proteolysis

Signaling pathways regulating, pluripotency of stem cell

Central carbon metabolism in cancer

  1. Due to the large number of target genes, only 10 are listed for each miRNA in the table